Thanks for the reply again, Gaijin, it's much appreciated!
I know the Mk2 is what makes Tokai, Tokai, but I just feel those pickups don't get the most out of the guitar. For a few months I had a pair of Tim White "Timbuckers" in the guitar. Even though these had similar very specifications to the Gotohs (both PAF-a-likes, similar output, similar dimensions), the difference in sound was enormous.
The Timbuckers sounded so much better that I couldn't believe the difference at first. The bridge pickup was much fatter, with better string definition and more harmonics; the neck was less 'woolly' than the Tokai; it had much better clarity while still retaining some warmth and excellent definition. I couldn't believe how great the guitar suddenly sounded; the best way to describe is that it just sounded twice as expensive all of a sudden. I'm not exaggerating.
I'm not expecting exactly the same tone of the Wolfetone-rewound Gotohs, but I was hoping to recapture some of that magic while not breaking my wallet again. I don't really want to sell the Gotohs, but I don't really like the way they sound either. So having them rewound by another 'boutique' winder seemed a good idea. The fact that I'd use the Mk2 for parts (which is indeed what I'm doing, I know it won't contribute to the tone), saves me over $140 for the pair (rewind is $50, new pickup is ~$120, plus import costs).
You do bring up an interesting point about getting a StewMac kit; maybe I should look into that. It would indeed salvage the Mk2's, which is an added bonus (but not really crucial, because I don't really like the way they sound, and I'm not really looking to sell them either).
I play very different types of music, but I lean toward (hard) rock. I'm looking for a tone that I described above: fat and warm bridge, which retains clarity and definition without sounding harsh (sounds impossible, but I've experienced that it can be done
). For the neck I'm looking for a good woody PAF-ish sound, don't really have words for that. Think Sweet Child O'Mine intro.
If you have any suggestions on how to improve the Mk2's, I'm always interested. I've set them up various ways already, which made a difference, but didn't bring didn't even bring them close to the same league as the Timbuckers for instance.